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Metagenomic Assembler

An extension of Velvet assembler to de novo metagenomic assembly. MetaVelvet An extension of Velvet assembler to de novo metagenome assembly from short sequence reads. MetaVelvet - SL An extension of Velvet assembler to de novo metagenomic assembler utilizing supervised learning. Namiki T, Hachiya T, Tanaka H, Sakakibara Y. 2012 MetaVelvet An extension of Velvet assembler to de novo. Metagenome assembly from short sequence reads. 4020, e155. Summplementary figures and tables.

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Bioinformatics Tools

Bioinformatics has evolved as a great tool for molecular biologists. There are various tools available for helping in reducing the time required to analyze biological materials be it DNA, RNA, Proteins etc. I wish to list here few of the commonly used tools. Please send me suggestions to improve the content. If you like or dislike something, let me know, your inputs matters. Monday, October 23, 2017.

Byte Size Biology

The musings and ravings of a computational biologist about science, computers, music and, you know, stuff. Machine learning people, your comments are welcome. How much do cows offset wind energy savings? On September 5th, 2016. For every 1kWh energy produced.

moregenomicsthanyoucanshakeastickat As defined in the Oxford English Dictionary as more than one can count

As defined in the Oxford English Dictionary as more than one can count. Each isolate of a species is therefore unambiguously characterised by a series of seven integers which correspond to the alleles at the seven house-keeping loci. The allelic profiles of isolates are then compared to existing databases. Selection of housekeeping loci necessitates a reference genome.

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Metagenomic Assembler

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An extension of Velvet assembler to de novo metagenomic assembly. MetaVelvet An extension of Velvet assembler to de novo metagenome assembly from short sequence reads. MetaVelvet - SL An extension of Velvet assembler to de novo metagenomic assembler utilizing supervised learning. Namiki T, Hachiya T, Tanaka H, Sakakibara Y. 2012 MetaVelvet An extension of Velvet assembler to de novo. Metagenome assembly from short sequence reads. 4020, e155. Summplementary figures and tables.

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